Functional mutation literature for SARS-CoV-2 lineage B.1.1.529

Characteristic mutations (HGVS syntax): S:p.A67V S:p.H69_V70del S:p.T95I S:p.G142D S:p.V143_Y145del S:p.N211_R214delinsIVREPE S:p.G339D S:p.S371L S:p.S373P S:p.S375F S:p.K417N S:p.N440K S:p.G446S S:p.S477N S:p.T478K S:p.E484A S:p.Q493K S:p.G496S S:p.Q498R S:p.N501Y S:p.Y505H S:p.T547K S:p.D614G S:p.H655Y S:p.N679K S:p.P681H S:p.N764K S:p.D796Y S:p.N856K S:p.Q954H S:p.N969K S:p.L981F PLpro:p.K38R PLpro:p.1069I PLpro:p.S1265_L1266delinsI PLpro:p.1892T nsp4:p.T492I 3CL:p.P132H nsp6:p.L105_G107del nsp6:p.I189V RdRp:p.P323L ExoN:p.I42V E:p.T9I M:p.D3G M:p.Q19E M:p.A63T N:p.P13L N:p.E31_S33del N:p.R203_G204KR
Calculated using representative genome EPI_ISL_6640916 submitted to GISAID on 2021-11-23, aligned using Pokay to all IEDB antigens as of 2021-11-24. See full alignments and disclaimers for B cell epitope alignments

ACE2 host variant dependency - 1 literature reference

Gene S — Spike protein

ACE2 receptor binding affinity - 26 literature references

Gene S — Spike protein

T cell evasion - 2 literature references

Gene S — Spike protein

Gene N — Nucleocapsid

Anthropozoonotic events - 2 literature references

Gene S — Spike protein

Antibody epitope effects - 23 literature references

Gene S — Spike protein

Convalescent plasma binding - 6 literature references

Gene S — Spike protein

Convalescent plasma escape - 15 literature references

Gene S — Spike protein

Environmental condition stability - 2 literature references

Gene S — Spike protein

Gene expression increase - 6 literature references

Gene S — Spike protein

Gene N — Nucleocapsid

Homoplasy - 4 literature references

Gene S — Spike protein

Gene E — Envelope protein

Gene N — Nucleocapsid

Immunosuppression variant emergence - 2 literature references

Gene S — Spike protein

Monoclonal antibody serial passage escape - 14 literature references

Gene S — Spike protein

Pharmaceutical effectiveness - 5 literature references

Gene S — Spike protein

Posttranslational modifications - 1 literature reference

Gene N — Nucleocapsid

Reinfection - 2 literature references

Gene S — Spike protein

Subgenomic RNA expression - 2 literature references

Gene N — Nucleocapsid

Symptom prevalence - 3 literature references

Gene S — Spike protein

Syncytium formation - 2 literature references

Gene S — Spike protein

Tissue specific neutralization - 1 literature reference

Gene S — Spike protein

Trafficking - 24 literature references

Gene S — Spike protein

Transmissibility - 2 literature references

Gene S — Spike protein

Vaccine efficacy - 1 literature reference

Gene S — Spike protein

Vaccine neutralization efficacy - 11 literature references

Gene S — Spike protein

Vaccinee plasma binding - 6 literature references

Gene S — Spike protein

Viral load - 1 literature reference

Gene S — Spike protein

Virion structure - 11 literature references

Gene S — Spike protein

Automatically generated using text2ui script and data from Pokay